Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015913409.1_cds_XP_016463477.1_56598
CDS Infomation

[gene=LOC107786503] [db_xref=GeneID:107786503] [protein=mechanosensitive ion channel protein 10-like isoform X2] [protein_id=XP_016463477.1] [location=complement(join(33083..33344,34775..34977,35062..35256,35342..35440,35755..35875,36007..37430))] [gbkey=CDS]
Sequence

ATGGATGCAAATGGTAAGGCTGCAAAGTTTAGTGGAGAAATAAGCATGTCAGAGAACAAG
AAAAACCCCAGTGATGAAGTGGTTGTCATGATCTCTGGAGATCATAAGGATTCTAAAAGT
CCTGTTGCACCAAAACCAACAGTCCTAGTCAGTGATTCCTCACCTGAAATTGCCAGGTAT
AGTCCAAGCCCAAGCCCCAACAAACCACCCAAAATCCCCACCACTGAAACTCTCACTCGA
CGAAAATCCCTTGCAAGATGTACGTATTCGAAACCTAAATCAAGATTCGGCGAACAATCT
GTACCTATTGATGCTAACATGTTTAATGAACAAGCTGCTGAGCCAAGTGCAAGTTCCCCC
AATAGGAATGTATCCAACCATGCTTCTCCTACTGCTAAAATGGGTTCCAGTAATACATTT
AAAGAAACTACGAGAACGGTGTCTATATCAGTAACCCCAAGAACACCATTAATGGCATCA
CCAGGTGGTTTTGGAGGAGTGGATGAAGATGAGGAGATATATAAGAAAGTGAGCTCAAGG
AATAGGTTGAAGTATAACAGAGTTAAAGCAAAAGTTCTGATTGAATGGCTGCTGTTTCTT
TTCCTTTTAGGATGTTTACTTGCTAGCTTATTGGTAAAGAAGTTCCAAAATTGGAAGCTT
TGGGATTTGAGGATCTGGAAATGGATTGTCCTTGTTATGGTGACCTTTAGTGGCATGCTG
GTTACTAAGTGGTTTATACATTTTGTTGCCTTGTTGATAGAATTGAACTTTTTGTTGAGG
AAGAAGGTGTTGTATTTTGTCTTTGGTTTAAAGAAAAGTGTTCAAGTTTGCATTTGGTTT
AGCTTGGTTCTTCTCACATGGGTTCTGCTCTTCTCAAACGAGGAACGGTCGCGTACCGCT
GAGAAGGTTACTAATTTTATTACCTGGACTATTACAGCTTTGCTTATTGGTGCATTCTTG
TGGCTCTTGAAGACTTTGCTGCTAAAGATTTTGGCTGCCTCTTTCCACGTAAACACATTC
TTTGACCGGATTCAAGAGTCAATTTTTCATCAGTATATTCTACTCACCCTATCCGGACTC
CCAGTTATGGAGTCTGCTCAGATGTTGGGGAGATCAAACAGTGCTGCCAGTCAATTTAGT
TTCCGCAGAACAAAGAAGGGAAAAGATGGGAAGGAAAAGAAAGAAAAGGCAGTGATTGAT
ATCAATAAACTTCATCAGATGAAGCGAGAAAAGGTCTCTGCATGGACCATGAAAACGTTA
ATTGATGTAATATCTAACTCAGGACTTTCCACTATCTCTGGCTCGCTCGGTGAGAATGAC
TATGATGCAGGTGGTGAGCAAGCAGATAAGGAGATCAACAATGAGGAGGAAGCAATTGCT
GCTGCCTATCACATTTTCAGGAATGTTGCATCGCCCGGTTCCAGGTACATTGATGAGTAT
GACCTTAGGAGATTCTTGATTAAAGAAGAGGTCGATATTGTGTTCCCCATGATAGATGTG
GCAGAAACTGGACAGATTGATAGGAAATCATTGACGGAATGGGTGGTTAAGGTTTATCAA
GGACGAAGAGCTCTATCGCATGCTTTGAATGATACAAAAACTGCTGTGAAGCAATTGAAC
AAGGTCGTGACGTGCATTCTGGTTCTNATAATAATCATCATATGGCTCCTTTTGGTGGGG
ATAGCGACTACTAAAGTGATTGTCTTTCTGTCGTCACAACTCGTGGTAGCTGCTTTTATT
TTTGGGAATACTTGCAAGACTATATTTGAAGCTATTATATTCGTATTTGTGATGCATCCT
TTTGATGTTGGTGATCGATGTGTCATTGATGGTGTTCAGATGATTGTTGAAGAAATGAAT
ATCCTGACCACAGTATTCTTGTGGTTTGATAACGAAAAGATATACTACCCAAATTCAGTT
TTGGCCGTCAAACCAATCAGCAATTTCTACAGAAGTCCTGATATGGGTGATGGCTTTGAG
TTTTCCGTTGATTACAAGACACCTGTGGAAAAGATAGGAGCTCTAAAAGAGAAAACAAAG
AAGTACTTAGAGAGAACTCCCCAGTATTGGCATCCTAATCACAGTGTGGTGGTGAAGGAG
ATTGAAAACATGAACAAAATAAAAATGGCACTCTATTTCAATCATACTATGAACTTTCAA
AACTTTGGTGAAAAGAATAGACGGAGAACTGAGTTGATCCTCGAAATGAAGAAAATGTTT
GACGAGCTTAACATAAAATATGATCTTCTTCCCCAGGAAGTTCATCTTCTCGATCAAAGA
GCAGTAAGTGGGAACACTAGATGA

Peptide Sequence

PEP ID

XP_016463477.1
PEP Infomation

PREDICTED: mechanosensitive ion channel protein 10-like isoform X2 [Nicotiana tabacum]
Sequence

MDANGKAAKFSGEISMSENKKNPSDEVVVMISGDHKDSKSPVAPKPTVLVSDSSPEIARY
SPSPSPNKPPKIPTTETLTRRKSLARCTYSKPKSRFGEQSVPIDANMFNEQAAEPSASSP
NRNVSNHASPTAKMGSSNTFKETTRTVSISVTPRTPLMASPGGFGGVDEDEEIYKKVSSR
NRLKYNRVKAKVLIEWLLFLFLLGCLLASLLVKKFQNWKLWDLRIWKWIVLVMVTFSGML
VTKWFIHFVALLIELNFLLRKKVLYFVFGLKKSVQVCIWFSLVLLTWVLLFSNEERSRTA
EKVTNFITWTITALLIGAFLWLLKTLLLKILAASFHVNTFFDRIQESIFHQYILLTLSGL
PVMESAQMLGRSNSAASQFSFRRTKKGKDGKEKKEKAVIDINKLHQMKREKVSAWTMKTL
IDVISNSGLSTISGSLGENDYDAGGEQADKEINNEEEAIAAAYHIFRNVASPGSRYIDEY
DLRRFLIKEEVDIVFPMIDVAETGQIDRKSLTEWVVKVYQGRRALSHALNDTKTAVKQLN
KVVTCILVLIIIIIWLLLVGIATTKVIVFLSSQLVVAAFIFGNTCKTIFEAIIFVFVMHP
FDVGDRCVIDGVQMIVEEMNILTTVFLWFDNEKIYYPNSVLAVKPISNFYRSPDMGDGFE
FSVDYKTPVEKIGALKEKTKKYLERTPQYWHPNHSVVVKEIENMNKIKMALYFNHTMNFQ
NFGEKNRRRTELILEMKKMFDELNIKYDLLPQEVHLLDQRAVSGNTR

Transcript Sequence

Gene sequence data has not been registered.